The Reading Terminal was closed because it was made obsolete by what is called the Commuter Tunnel that connected the former Reading commuter lines with the Pennsy commuter lines. Both of these lines had been taken over by SEPTA in 1976. It was now one system but the former Pennsy lines ended at Suburban Station at Broad St. The former Reading lines ended at the Reading Terminal 2 blocks away. The Commuter Tunnel connected these two lines. Suburban Station was below street level. The Reading Terminal train shed, where the tracks ended, was above street level. The lines were connected below street level so the train shed became part of the Pennsylvania Convention center and the stations were moved below ground and provided access to the Gallery shopping mall next door to the Reading Terminal.
The Reading Terminal building is still there. The Reading Terminal Market, where farmers would bring produce to sell in the city by train, is still there. The trains run underground and the SEPTA system is now connected.
I'm sure that others can provide more details about why and how the plan was developed this way.